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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*01:01-B*15:01-C*03:03-DRB1*04:01-DQB1*03:01 | USA NMDP American Indian South or Central America | 0.12 | 5,926 | 38_45_N_76_6_W |
| 2 | A*02:01:01-B*15:01:01-C*01:02:01-DRB1*04:07:01-DQB1*03:02:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 3 | A*02:01:01-B*15:01:01-C*01:02:01-DRB1*08:02:01-DQB1*04:02 | Mexico Hidalgo Mezquital Valley/ Otomi | 3.47 | 72 | 20_28_N_99_13_W |
| 4 | A*02:01:01-B*15:01:01-C*01:02:01-DRB1*14:06:01-DQB1*03:01:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 5 | A*02:01:01-B*15:01:01-C*04:01:01-DRB1*04:04:01-DQB1*03:02:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 6 | A*02:01:01-B*15:01:01-C*08:01:01-DRB1*04:07:01-DQB1*03:02:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 7 | A*02:01-B*15:01 | USA North American Native | 2.20 | 187 | 30_0_N_95_0_W |
| 8 | A*02:01-B*15:01-C*01:02-DRB1*04:11-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 9 | A*02:01-B*15:01-C*01:02-DRB1*08:02-DQB1*04:02 | USA NMDP Alaska Native or Aleut | 0.28 | 1,376 | 38_45_N_76_6_W |
| 10 | A*02:01-B*15:01-C*01:02-DRB1*16:02-DQB1*03:01 | Colombia North Chimila Amerindians | 2.13 | 47 | 10_1_N_74_13_W |
| 11 | A*02:01-B*15:01-C*03:03-DRB1*01:01-DQB1*05:01 | USA NMDP American Indian South or Central America | 0.20 | 5,926 | 38_45_N_76_6_W |
| 12 | A*02:01-B*15:01-C*03:03-DRB1*04:01-DQB1*03:01 | USA NMDP American Indian South or Central America | 0.40 | 5,926 | 38_45_N_76_6_W |
| 13 | A*02:01-B*15:01-C*03:03-DRB1*04:01-DQB1*03:02 | USA NMDP American Indian South or Central America | 0.14 | 5,926 | 38_45_N_76_6_W |
| 14 | A*02:01-B*15:01-C*03:03-DRB1*04:01-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.19 | 1,376 | 38_45_N_76_6_W |
| 15 | A*02:01-B*15:01-C*03:03-DRB1*13:01-DQB1*06:03 | USA NMDP American Indian South or Central America | 0.30 | 5,926 | 38_45_N_76_6_W |
| 16 | A*02:01-B*15:01-C*03:03-DRB1*15:01-DQB1*06:02 | USA NMDP American Indian South or Central America | 0.21 | 5,926 | 38_45_N_76_6_W |
| 17 | A*02:01-B*15:01-C*03:04-DRB1*04:01-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.73 | 1,376 | 38_45_N_76_6_W |
| 18 | A*02:01-B*15:01-C*03:04-DRB1*04:01-DQB1*03:02 | USA NMDP American Indian South or Central America | 0.43 | 5,926 | 38_45_N_76_6_W |
| 19 | A*02:01-B*15:01-C*03:04-DRB1*04:01-DQB1*03:02 | USA NMDP Caribean Indian | 0.22 | 14,339 | 38_45_N_76_6_W |
| 20 | A*02:01-B*15:01-C*03:04-DRB1*04:01-DRB4*01:01-DQB1*03:02 | USA NMDP North American Amerindian | 0.62 | 35,791 | 38_45_N_76_6_W |
| 21 | A*02:01-B*15:01-DRB1*04:03 | Mexico Oaxaca Jamiltepec Mixtec | 0.52 | 96 | 16_25_N_97_58_W |
| 22 | A*02:01-B*15:01-DRB1*04:03-DQB1*03:02 | Peru Titikaka Lake Uros | 0.48 | 105 | 15_50_S_70_1_W |
| 23 | A*02:01-B*15:01-DRB1*04:07-DQB1*03:02 | Peru Titikaka Lake Uros | 0.48 | 105 | 15_50_S_70_1_W |
| 24 | A*02:01-B*15:01-DRB1*09:01-DQB1*03:03 | Peru Titikaka Lake Uros | 0.49 | 105 | 15_50_S_70_1_W |
| 25 | A*02:01-B*15:01-DRB1*14:02-DQB1*03:01 | Peru Titikaka Lake Uros | 0.48 | 105 | 15_50_S_70_1_W |
| 26 | A*02:06-B*15:01 | USA North American Native | 1.30 | 187 | 30_0_N_95_0_W |
| 27 | A*02:06-B*15:01-C*01:02 | USA North American Native | 1.10 | 187 | 30_0_N_95_0_W |
| 28 | A*02:06-B*15:01-C*01:02-DRB1*04:03-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.29 | 1,376 | 38_45_N_76_6_W |
| 29 | A*02:06-B*15:01-C*01:02-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 1.18 | 1,376 | 38_45_N_76_6_W |
| 30 | A*02:06-B*15:01-C*03:03-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.17 | 1,376 | 38_45_N_76_6_W |
| 31 | A*02:22:01-B*15:01:01-C*01:02:01-DRB1*16:02:01 | Costa Rica Amerindians (G) | 0.40 | 125 | 9_34_N_83_25_W |
| 32 | A*03:01:01-B*15:01:01-C*03:03:01-DRB1*01:01 | Costa Rica Amerindians (G) | 0.40 | 125 | 9_34_N_83_25_W |
| 33 | A*03:01-B*15:01-C*03:04-DRB1*04:01-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.30 | 1,376 | 38_45_N_76_6_W |
| 34 | A*24:02:01-B*15:01:01-C*01:02:01-DRB1*04:07:01-DQB1*03:02:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 35 | A*24:02:01-B*15:01:01-C*03:03:01-DRB1*01:01 | Costa Rica Amerindians (G) | 2.45 | 125 | 9_34_N_83_25_W |
| 36 | A*24:02:01-B*15:01-C*01:02 | Mexico Chihuahua Tarahumara | 11.40 | 44 | 27_30_N_107_45_W |
| 37 | A*24:02:01-B*15:01-C*01:02-DRB1*14:02-DQB1*03:01-DPB1*04:01 | Mexico Chihuahua Tarahumara | 3.40 | 44 | 27_30_N_107_45_W |
| 38 | A*24:02:01-B*15:01-C*01:02-DRB1*14:02-DQB1*03:01-DPB1*04:02 | Mexico Chihuahua Tarahumara | 8.00 | 44 | 27_30_N_107_45_W |
| 39 | A*24:02-B*15:01 | USA North American Native | 3.30 | 187 | 30_0_N_95_0_W |
| 40 | A*24:02-B*15:01 | USA Alaska Yupik | 4.00 | 252 | 60_48_N_161_26_W |
| 41 | A*24:02-B*15:01-C*01:02 | USA North American Native | 1.60 | 187 | 30_0_N_95_0_W |
| 42 | A*24:02-B*15:01-C*01:02-DRB1*04:03-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 43 | A*24:02-B*15:01-C*01:02-DRB1*04:07-DQB1*03:02 | Colombia North Wiwa El Encanto | 4.81 | 52 | 10_10_N_73_53_W |
| 44 | A*24:02-B*15:01-C*01:02-DRB1*04:11-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 45 | A*24:02-B*15:01-C*01:02-DRB1*08:02-DQB1*04:02 | Colombia North Wiwa El Encanto | 0.96 | 52 | 10_10_N_73_53_W |
| 46 | A*24:02-B*15:01-C*01:02-DRB1*16:02-DQA1*05:05-DQB1*03:01 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 47 | A*24:02-B*15:01-C*03:03-DRB1*04:01-DQB1*03:02 | USA NMDP Caribean Indian | 0.21 | 14,339 | 38_45_N_76_6_W |
| 48 | A*24:02-B*15:01-C*03:03-DRB1*04:04-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.28 | 1,376 | 38_45_N_76_6_W |
| 49 | A*24:02-B*15:01-C*03:03-DRB1*13:01-DQB1*06:03 | USA NMDP Alaska Native or Aleut | 0.31 | 1,376 | 38_45_N_76_6_W |
| 50 | A*24:02-B*15:01-C*03:03-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.70 | 1,376 | 38_45_N_76_6_W |
| 51 | A*24:02-B*15:01-DRB1*01:01-DQB1*05:01 | Peru Titikaka Lake Uros | 0.48 | 105 | 15_50_S_70_1_W |
| 52 | A*24:02-B*15:01-DRB1*14:02-DQB1*03:01 | USA Alaska Yupik | 3.80 | 252 | 60_48_N_161_26_W |
| 53 | A*24:02-B*15:01-DRB1*16:02-DQB1*03:01 | USA South Dakota Lakota Sioux | 2.90 | 302 | 44_30_N_100_0_W |
| 54 | A*31:01:02-B*15:01:01-C*01:02:01-DRB1*04:07 | Costa Rica Amerindians (G) | 0.40 | 125 | 9_34_N_83_25_W |
| 55 | A*31:01:02-B*15:01:01-C*04:01:01-DRB1*01:01:01-DQB1*05:01:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 56 | A*31:01:02-B*15:01-DRB1*04:03-DQB1*03:02 | USA South Dakota Lakota Sioux | 2.20 | 302 | 44_30_N_100_0_W |
| 57 | A*31:01:02-B*15:01-DRB1*08:02-DQB1*04:02 | Peru Titikaka Lake Uros | 0.48 | 105 | 15_50_S_70_1_W |
| 58 | A*31:01:02-B*15:01-DRB1*09:01-DQB1*03:03 | Peru Titikaka Lake Uros | 0.93 | 105 | 15_50_S_70_1_W |
| 59 | A*31:01-B*15:01-C*01:02-DRB1*04:03-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 60 | A*31:01-B*15:01-C*01:02-DRB1*04:03-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.40 | 1,376 | 38_45_N_76_6_W |
| 61 | A*31:01-B*15:01-C*01:02-DRB1*04:11-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 62 | A*31:01-B*15:01-C*04:01-DRB1*09:01-DQA1*03:03-DQB1*05:01 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 63 | A*31:01-B*15:01-DRB1*04:07 | Mexico Oaxaca Jamiltepec Mixtec | 0.52 | 96 | 16_25_N_97_58_W |
| 64 | A*32:01-B*15:01-DRB1*04:03-DQB1*03:02 | Chile Mapuche | 0.77 | 66 | 37_48_S_73_23_W |
| 65 | A*68:01-B*15:01-C*01:02-DRB1*04:04-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 66 | A*68:01-B*15:01-C*01:02-DRB1*04:04-DQA1*03:01-DQB1*03:03 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 67 | A*68:01-B*15:01-C*01:02-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 68 | A*68:01-B*15:01-C*01:02-DRB1*04:07-DQB1*03:02 | Colombia North Wiwa El Encanto | 0.96 | 52 | 10_10_N_73_53_W |
| 69 | A*68:01-B*15:01-C*03:03-DRB1*04:01-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.25 | 1,376 | 38_45_N_76_6_W |
| 70 | A*68:01-B*15:01-C*03:03-DRB1*14:02-DQB1*03:02 | Colombia North Wiwa El Encanto | 2.88 | 52 | 10_10_N_73_53_W |
| 71 | A*68:01-B*15:01-C*03:04-DRB1*14:02-DQB1*03:01 | Colombia North Wiwa El Encanto | 1.92 | 52 | 10_10_N_73_53_W |
| 72 | A*68:01-B*15:01-DRB1*04:02-DQB1*03:02 | Chile Mapuche | 0.77 | 66 | 37_48_S_73_23_W |
| 73 | A*68:01-B*15:01-DRB1*04:04-DQB1*03:02 | Chile Mapuche | 0.77 | 66 | 37_48_S_73_23_W |
| 74 | A*68:01-B*15:01-DRB1*14:02-DQB1*03:01 | Chile Mapuche | 0.77 | 66 | 37_48_S_73_23_W |
| 75 | A*68:05-B*15:01-C*01:02-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 76 | A*68:19-B*15:01-C*03:28-DRB1*04:03-DQB1*03:02 | Colombia North Wiwa El Encanto | 0.96 | 52 | 10_10_N_73_53_W |
| 77 | B*15:01-C*01:02 | Mexico Oaxaca Zapotec | 1.80 | 90 | 17_5_N_96_45_W |
| 78 | B*15:01-C*01:02 | USA North American Native | 4.20 | 187 | 30_0_N_95_0_W |
| 79 | B*15:01-C*03:03 | USA North American Native | 1.10 | 187 | 30_0_N_95_0_W |
| 80 | B*15:01-C*03:03 | USA Alaska Yupik | 4.40 | 252 | 60_48_N_161_26_W |
| 81 | B*15:01-C*03:04 | USA North American Native | 1.40 | 187 | 30_0_N_95_0_W |
| 82 | B*15:01-DRB1*14:02 | USA Alaska Yupik | 3.60 | 252 | 60_48_N_161_26_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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